Insertion junction: CLIP2.005794_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005794
Chromosome:chromosome 17
Location:3118398
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g720550 (1 of 1) PTHR34202:SF1 - UPF0548 PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCGAGTCAATGATCCAGCCCTGTTTTGCGAGCGCCTGAACGGCGGCGGG
Internal bar code:TGTGGCGTCACCCATAGCGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1222
LEAP-Seq percent confirming:87.8788
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:ATTCCACCTCCTCCGCAAAG
Suggested primer 2:TGACTCAGATGCACGCCAAT