Insertion junction: CLIP2.005796_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005796
Chromosome:chromosome 3
Location:6836421
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g197450 (1 of 1) PTHR10799:SF676 - WINGED HELIX DNA-BINDING DOMAIN-CONTAINING PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGATCCCCAGCGGCCCTGCGCTGCGGCTGCTGTGGGAGATCGACGCGTT
Internal bar code:ATTTCTGAAGGGCGAGCTTCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:5881
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CATGCCATCCAAATTGCCGT
Suggested primer 2:CCTGTGAATTGGTGCACGTG