Insertion junction: CLIP2.005796_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.005796
Chromosome:chromosome 3
Location:6836423
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g197450 (1 of 1) PTHR10799:SF676 - WINGED HELIX DNA-BINDING DOMAIN-CONTAINING PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGAAGTCCTGCGAGGAGGCAGCAACACACACAGCGCAGTGCGAGGTCGG
Internal bar code:TATCACGGCCCGTAGCCGGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:4273
LEAP-Seq percent confirming:98.8235
LEAP-Seq n confirming:84
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:85

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGTGAATTGGTGCACGTG
Suggested primer 2:CATGCCATCCAAATTGCCGT