Insertion junction: CLIP2.005805_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005805
Chromosome:chromosome 12
Location:2877470
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g502950 CPL15 RNA-binding S4 domain-containing protein; (1 of 1) IPR002942//IPR017506 - RNA-binding S4 domain // Photosystem II S4 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGCAGGTGGGCACTGGAGGGCTGGGGGCAGGAGCGGCGGCCGGAGGCC
Internal bar code:GATTTTCAGCTCTGTAATTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:4355
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TACCGCATCATAGTGACCGC
Suggested primer 2:TCAAGCACTAGCACAGGAGC