Insertion junction: CLIP2.005809_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.005809
Chromosome:chromosome 17
Location:3686565
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g725750 (1 of 3) K11089 - 60 kDa SS-A/Ro ribonucleoprotein (TROVE2, SSA2) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTCCGGGTGCGCCAGTCGCAGCAGGTCGGCATGGCTCCAGCCGTTGCGC
Internal bar code:CAGTTAGGCCTAGTCTTAAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2213
LEAP-Seq percent confirming:98.0392
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTGAGCAACTGGGAAGAT
Suggested primer 2:TGACGGCTGAAACTGGGATC