Insertion junction: CLIP2.005815_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005815
Chromosome:chromosome 3
Location:6561297
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g194450 CGL24 Conserved in the Green Lineage CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCGATGCACAGCAGCGGCCGGCCGCCCAGCACTGCGCCCAGCTGCTCG
Internal bar code:GGAGCGGGTGTTCGGCTGGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:4738
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTCATTCAGTACCGCCAG
Suggested primer 2:ATGTAAAAGGGGAGCTGGCC