Insertion junction: CLIP2.005826_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.005826
Chromosome:chromosome 14
Location:1732968
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre14.g619100 CLPR1 (1 of 2) PTHR10381//PTHR10381:SF18 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT // SUBFAMILY NOT NAMED; inactive subunit of chloroplast ClpP complex intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATTTGGCGAGCACTTGGTAAAGGGGCACAGCCGCGGGACAGGAGCGTCG
Internal bar code:TTAAGTCAACGTAATAGTCTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:100
LEAP-Seq percent confirming:4.85437
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:98
LEAP-Seq n unique pos:103

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCAGCGTAGTACTTGGTG
Suggested primer 2:GTGAGTACCGGCTCAAACCA