Insertion junction: CLIP2.005827_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.005827
Chromosome:chromosome 13
Location:4424646
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g602350 (1 of 1) K01609 - indole-3-glycerol phosphate synthase (trpC) 3'UTR
Cre13.g602400 KIN8A,KIN8-1 Kinesin motor protein; (1 of 1) K10401 - kinesin family member 18/19 (KIF18_19) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTACTCATTGAGTAGAACGCAAGGCTCCATACCACCCTTACCTTCCTGT
Internal bar code:CGGCATGTTCTTGATCAAGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1211
LEAP-Seq percent confirming:51.6129
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGAGAGGGAGGAGTCGAA
Suggested primer 2:ACTGTACGGTGAGGCTGTTG