Insertion junction: CLIP2.005829_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.005829
Chromosome:chromosome 12
Location:6313218
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g536800 CGL52 (1 of 8) PF10184 - Uncharacterized conserved protein (DUF2358) (DUF2358); Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGTATATACAGCGTATTGCGGCTTTGCCGTATCGACGCCTAGGGAGAA
Internal bar code:TTGTATGCTCATGATCTAGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1425
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:ACCGCTCTACTCTCCCACTT
Suggested primer 2:AGGCAGGGATTGTGATGTGG