Insertion junction: CLIP2.005830_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005830
Chromosome:chromosome 6
Location:4012479
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278212 CGL46 Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGTGAATCTCTCCGCGCTGCAGGTGTGCATTACGGAGCTGGAACGGAGT
Internal bar code:GGCAGCATAAACTCTGATTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:4992
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:GACTGCAGTCACCGTACACA
Suggested primer 2:TCCGTCACTTGCTCTTCCAC