Insertion junction: CLIP2.005834_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.005834
Chromosome:chromosome 16
Location:257612
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre16.g694400 TGD2,CGL57 Trigalactosyldiacylglycerol 2; (1 of 2) PF02470 - MlaD protein (MlaD) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGACTAGGTGCGAACTGTGTGAATGTGTGTGTGTTGCGTGTTTGTGGG
Internal bar code:GGTCCCCCTGGTGAGTAAATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:474
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTGAAGCCCGCCAAATTG
Suggested primer 2:CACGGCTGAACCACTTGTTG