Insertion junction: CLIP2.005836_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.005836
Chromosome:chromosome 6
Location:7717781
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g302650 RRM5 (1 of 2) 2.1.1.166 - 23S rRNA (uridine(2552)-2'-O)-methyltransferase / Um2552 methyltransferase; Putative ribosomal RNA methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGATGAACCCTGGGGTGCTCACCTTACGCCGCGTCCCGCACACCTGCA
Internal bar code:CCAACTTAATGGTTTAGTCTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:621
LEAP-Seq percent confirming:69.5652
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GACAGCACCGTGTCAAAACC
Suggested primer 2:CGTCGGTACCAGTATGTCGG