Insertion junction: CLIP2.005844_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.005844
Chromosome:chromosome 17
Location:886834
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g702500 TAB2 (1 of 1) PTHR34556//PTHR34556:SF2 - FAMILY NOT NAMED // F17A17.35 PROTEIN; conserved chloroplast PsaB RNA binding protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTTCGCTGGTATTGAACGCCTTCATCCTACTATCCGGCCACCCAGCCG
Internal bar code:CCTGCCCTAATCCTGATCACAG

Confirmation - LEAP-Seq

LEAP-Seq distance:903
LEAP-Seq percent confirming:4.54545
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TTAAGTCAGCCACCGTGACC
Suggested primer 2:CCATAACCCTACCCCTCCCA