Insertion junction: CLIP2.005845_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.005845
Chromosome:chromosome 1
Location:119311
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g000850 CPLD38 (1 of 1) PF11460 - Protein of unknown function (DUF3007) (DUF3007); cytochrome b6f biogenesis protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGTAGCCCTGCCCAGTCACGTGCTGCGCTCTGACCTGACCTGCCCCGC
Internal bar code:ATACTACCTTGCCACCCACACC

Confirmation - LEAP-Seq

LEAP-Seq distance:2344
LEAP-Seq percent confirming:48.6842
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:39
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:ACTACAAACAACCGGCGCTA
Suggested primer 2:GACGTCATCCTTATCGGCGT