Insertion junction: CLIP2.005845_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005845
Chromosome:chromosome 1
Location:119334
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g000850 CPLD38 (1 of 1) PF11460 - Protein of unknown function (DUF3007) (DUF3007); cytochrome b6f biogenesis protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCATTACGCAGCCGCGCAGCCACAGACAGAGCGTTAGCGCCCGGCTCCA
Internal bar code:GCTAGTTGGTGTTACTGTATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3164
LEAP-Seq percent confirming:88.0952
LEAP-Seq n confirming:74
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:84

Suggested primers for confirmation by PCR

Suggested primer 1:GACGTCATCCTTATCGGCGT
Suggested primer 2:ACTACAAACAACCGGCGCTA