Insertion junction: CLIP2.005854_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.005854
Chromosome:chromosome 12
Location:1884806
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g512050 (1 of 57) 2.7.10.2 - Non-specific protein-tyrosine kinase / Cytoplasmic protein tyrosine kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTCAAGGCAAGCAAGGCACGGCTAGCACCGAAGTAAACCGTGTGCAGCA
Internal bar code:ACCAGTTTGGGGGGAGACCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1069
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TCATGGTGCTTCTGCGGAAT
Suggested primer 2:AGCTTGATGATGTTCGGCCA