Insertion junction: CLIP2.005861_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005861
Chromosome:chromosome 6
Location:8675619
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g310050 CPL13 Conserved in the Plant Lineage; (1 of 1) PTHR10794//PTHR10794:SF53 - ABHYDROLASE DOMAIN-CONTAINING PROTEIN // CAAX AMINO TERMINAL PROTEASE FAMILY PROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCAGCGTCGCCCGTTGCGCTAGCGCGACTTCCCATGCGAGGCGTGGCG
Internal bar code:GAAACACAAGGATAGGCAACCG

Confirmation - LEAP-Seq

LEAP-Seq distance:3147
LEAP-Seq percent confirming:95.5056
LEAP-Seq n confirming:85
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:89

Suggested primers for confirmation by PCR

Suggested primer 1:ACACAGGTCTGCGGTACATG
Suggested primer 2:GACGCAGCCAACATTGTTGT