Insertion junction: CLIP2.005868_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005868
Chromosome:chromosome 6
Location:2568450
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g269650 (1 of 3) 2.4.1.19 - Cyclomaltodextrin glucanotransferase / Cyclodextrin glycosyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCTGCCGCAGCGTGAGAACCCTACTGTGGCAGCGGTGAAGCGCAGCGCA
Internal bar code:GCTGCGGACATGACCCAAGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1876
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGTGCATCTTCAGTGGAT
Suggested primer 2:TGGACACATGCTCTCACACC