Insertion junction: CLIP2.005869_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.005869
Chromosome:chromosome 16
Location:4819003
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g687450 CPLD54 (1 of 1) PTHR16254//PTHR16254:SF6 - POTASSIUM/PROTON ANTIPORTER-RELATED // K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC; potassium ion transmembrane transporter CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTGCTGTTCCTGCTGTTTGAGATGGGGCTTGAGCTGTCTCTGGACCGT
Internal bar code:TAGTAGCTTGACAAATTTCTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:860
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TCCAGGAAGATGGTCCCGAT
Suggested primer 2:GTGGTGTTGAAGCAGCTTGG