Insertion junction: CLIP2.005874_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.005874
Chromosome:chromosome 1
Location:2038618
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g011200 (1 of 1) PF04658 - TAFII55 protein conserved region (TAFII55_N) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGCAGGTTGGTGAAGTCGCGCAGGGTGCAGCTGATTCCCAGACCCCAG
Internal bar code:ATATGACGCCAATTTTGTTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3525
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTGCTGTGAACCTGTGGT
Suggested primer 2:GGCTTACCTACCACACACCC