Insertion junction: CLIP2.005880_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005880
Chromosome:chromosome 12
Location:2206011
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g509001 RPK2 RNA-polymerase-subunit kinase; (1 of 2) PTHR24055//PTHR24055:SF10 - MITOGEN-ACTIVATED PROTEIN KINASE // MITOGEN-ACTIVATED PROTEIN KINASE 3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAGCTGGGGCCCTGCCGTGCTGCTAAGCGTGCTGCGCGAATGTACGGTA
Internal bar code:TTAAAAAGATATCGTTCGGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2076
LEAP-Seq percent confirming:94.5455
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:CACAGTTCCGTACACGACCA
Suggested primer 2:CTTCGAACACCACAGCCTCT