Insertion junction: CLIP2.005882_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.005882
Chromosome:chromosome 3
Location:8557405
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g210961 (1 of 1) PTHR10174:SF127 - PHOSPHATIDYLINOSITOL TRANSFER PROTEIN PDR16-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTTCTGTATTCCGCACACCTACGTGCGCTACCTACGAGCCAGGTGCGA
Internal bar code:GTAACACCCCCATGAGTTGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:769
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GAGATGCGGCTTGTACTCCA
Suggested primer 2:GTAGAATTGGGGGTTGGGGG