Insertion junction: CLIP2.005882_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005882
Chromosome:chromosome 3
Location:8557406
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g210961 (1 of 1) PTHR10174:SF127 - PHOSPHATIDYLINOSITOL TRANSFER PROTEIN PDR16-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAAGGCACGGGTGCCGCTCAACGATTGGCGCTACTTCGCGCTTGAGCTG
Internal bar code:GTAACACCCCCATGAGTTGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:4189
LEAP-Seq percent confirming:90.5263
LEAP-Seq n confirming:86
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:95

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGAATTGGGGGTTGGGGG
Suggested primer 2:GAGATGCGGCTTGTACTCCA