Insertion junction: CLIP2.005883_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.005883
Chromosome:chromosome 3
Location:1209701
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g149550 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAAGTGCCCCTTTCGTAGGGCCTTGGATGTCGTTGGCGAGAACGTGGTT
Internal bar code:ATTGCAGCTCGAGTGGGAGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2278
LEAP-Seq percent confirming:98.5075
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:CGCATATCCACGTGCCTTTG
Suggested primer 2:TAAAGGTGGCCGACATGCAT