Insertion junction: CLIP2.005885_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005885
Chromosome:chromosome 6
Location:1890155
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g264100 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATGTCGGAGGAAGGGCAGTAGAAGCCAGCTTGGTCCTGTGAGAACGGCG
Internal bar code:TGGTTCATGGTCCTCAGCCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3436
LEAP-Seq percent confirming:88.8199
LEAP-Seq n confirming:143
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:161

Suggested primers for confirmation by PCR

Suggested primer 1:AACCCTCACCCAAAAGGCAA
Suggested primer 2:CACCTGGCCTTAAGTGGAGG