Insertion junction: CLIP2.005889_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.005889
Chromosome:chromosome 17
Location:2501787
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g715653 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGACAAAGAAGTGATTGAGGAGGCCGCTGCTGTCGCTGTCAGGGGGTG
Internal bar code:TGTAGCACTGTAGTTATATTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2173
LEAP-Seq percent confirming:94.2857
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCTCTTCCCTGCTAGACT
Suggested primer 2:TCGAGGGTGTAGTGGGTTCT