Insertion junction: CLIP2.005892_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005892
Chromosome:chromosome 3
Location:5417898
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g183850 FDX6 (1 of 1) IPR001041//IPR010241//IPR012675 - 2Fe-2S ferredoxin-type iron-sulfur binding domain // Ferredoxin [2Fe-2S], plant // Beta-grasp domain; Apoferredoxin, chloroplast precursor 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGTGTCAACAAAGTGAGCAACGAAGAAGTGGCGCTGTAGGGTCGCTGC
Internal bar code:ACACCCAGGTTGAGATTCTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:863
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:GCCGAGTGATTTTGCTTGCA
Suggested primer 2:CTGCAAGAGATTCGCGAAGC