Insertion junction: CLIP2.005894_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.005894
Chromosome:chromosome 14
Location:939711
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g613450 CGL87 (1 of 1) PTHR12818:SF0 - NEF-ASSOCIATED PROTEIN 1; Conserved in the Green Lineage 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGCGCTAGTGTCCGGTTACGGACGTGTGCCAACTGCCAGGCACGCGAT
Internal bar code:TCCTTCGATTTGATTTGGGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1828
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GATGGTGGTGGTGGTAGTGG
Suggested primer 2:AACACAGGCGCGTAACACTA