Insertion junction: CLIP2.005900_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.005900
Chromosome:chromosome 10
Location:1663742
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g429650 (1 of 26) IPR029058//IPR029059 - Alpha/Beta hydrolase fold // Alpha/beta hydrolase fold-5 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTCGGTGCTCGCGGCAGCAGCTGCAGCGGCCGCGCCCGCCGGCGCGGC
Internal bar code:AGGCGTTAAGTCGATAACCAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1221
LEAP-Seq percent confirming:73.3333
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCACCTGATCGAGATGGG
Suggested primer 2:GTGATCCCAGACAGTGTGCA