Insertion junction: CLIP2.005911_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.005911
Chromosome:chromosome 9
Location:576807
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre18.g748397 CGL143 predicted protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCTGTACCGGTAGTCAGTCAGTCATTCAGTCCGGCTCGGCCACGGGTG
Internal bar code:GGATTGATCGGGCATAATTACA

Confirmation - LEAP-Seq

LEAP-Seq distance:816
LEAP-Seq percent confirming:76.9231
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TCTTTACGGCGTTTCCTGCT
Suggested primer 2:GGTCAGGGGACAGGATAGGT