Insertion junction: CLIP2.005912_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.005912
Chromosome:chromosome 1
Location:3700234
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g024050 (1 of 26) IPR013026//IPR019734 - Tetratricopeptide repeat-containing domain // Tetratricopeptide repeat intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGTTTCACCTCCCCCCTGCGCCGAACCTGCTAAGGCCACTGAACAACCC
Internal bar code:CGTCTGCGATTTGCGCTCTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1460
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCATTTCCTTCTCTGCCT
Suggested primer 2:CCGCCTTCTCGTAGTAGCTG