Insertion junction: CLIP2.005916_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005916
Chromosome:chromosome 7
Location:3689054
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g337650 PDC1 Mitochondrial pyruvate dehydrogenase complex, E1 component, alpha subunit; (1 of 1) PTHR11516//PTHR11516:SF40 - PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR // PDHA1 PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGATAGCGCAAGTGTCAAGTGCCGACGGGGGCGGGACGAGGGCTGAGAT
Internal bar code:CCGATGTTAGAAATTCCGGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:553
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CCCACCCCCTTCTTTCTCAC
Suggested primer 2:TGGCACCAATCTCACACCTC