Insertion junction: CLIP2.005925_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.005925
Chromosome:chromosome 12
Location:4945487
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g524500 RMT2 Putative protein N-methyltransferase; (1 of 2) PTHR13271//PTHR13271:SF30 - UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGAAGGTTGCAGGCGAGGACGAGGTGGGCTGAGACAGTGGGGCAGGGAA
Internal bar code:GGCAGAGGTATGGGGTGACATA

Confirmation - LEAP-Seq

LEAP-Seq distance:5811
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:82
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:82

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGTACCACAGCAGCTCT
Suggested primer 2:CTCCCTCCTCCCACACAAAC