Insertion junction: CLIP2.005939_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005939
Chromosome:chromosome 3
Location:740100
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145987 (1 of 7) IPR000104//IPR020683 - Antifreeze protein, type I // Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCTGCAGGGCCCCGGGCGGCTGGGGCTGAGGATGCGGACTTTGGCTTTG
Internal bar code:GGAGAACGCGTTGGGCGGAGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3910
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:AGATGATCGTGTTGGGGTCG
Suggested primer 2:CAATCGAGCTCTGGACGGAA