Insertion junction: CLIP2.005941_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.005941
Chromosome:chromosome 17
Location:2220700
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g712850 TRX23,TRL9 (1 of 11) IPR012336//IPR013766 - Thioredoxin-like fold // Thioredoxin domain; Thioredoxin-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCTTACCAACCTTCCTGTGCACCCCGCCTATCGGCATTCGTGTCCTAT
Internal bar code:ATATAAGGGCCATCGCGCTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:372
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCATGTCAACCAAAAGGG
Suggested primer 2:CTGCGACCAATGAAGCATCG