Insertion junction: CLIP2.005948_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005948
Chromosome:chromosome 1
Location:4691676
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g032500 DNJ8,TPR2 Tetratricopeptide-repeat protein 2; (1 of 1) K09523 - DnaJ homolog subfamily C member 3 (DNAJC3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTATGTATGTGTGTACACACGCGCGCGAGTTTGTGCAGGTGTGTGCGCG
Internal bar code:GCAACTGGATCATAGCTCCAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1945
LEAP-Seq percent confirming:97.619
LEAP-Seq n confirming:82
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:84

Suggested primers for confirmation by PCR

Suggested primer 1:AACTCAACACGTGTGCATGC
Suggested primer 2:CTGCGATGATGTGTTCTGCG