Insertion junction: CLIP2.005955_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.005955
Chromosome:chromosome 10
Location:1365108
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g427800 (1 of 3) IPR002889//IPR013994 - Carbohydrate-binding WSC // Carbohydrate-binding WSC, subgroup intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCCACCGCAACTCACCTACGGTCAGGTCGTAGATCTTGCCGGCCTGGC
Internal bar code:ATAGAAACGAGGTCACGCGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1518
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CAACTCGACGTACACACCCA
Suggested primer 2:AAGATCTATACACCGGCGCG