Insertion junction: CLIP2.005955_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005955
Chromosome:chromosome 10
Location:1365125
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g427800 (1 of 3) IPR002889//IPR013994 - Carbohydrate-binding WSC // Carbohydrate-binding WSC, subgroup intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTCCTGGGGATGTACTTGTGGTTGCTGGAGTGCGAGAGCTTGAAGGAT
Internal bar code:ATTTTGGGGGTGCGAGAAGTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1971
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:AAGATCTATACACCGGCGCG
Suggested primer 2:CAACTCGACGTACACACCCA