Insertion junction: CLIP2.005957_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.005957
Chromosome:chromosome 6
Location:2567842
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g269650 (1 of 3) 2.4.1.19 - Cyclomaltodextrin glucanotransferase / Cyclodextrin glycosyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGCTTGGCCGTGTTGTGGCTTGCCAATCACCACAGCGCCACGCCGCAG
Internal bar code:TACTGGTTGTATGTAAATCCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1260
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTGGCATGTCCTGTGTAC
Suggested primer 2:TGCCACTCGCACACATTTTG