Insertion junction: CLIP2.005963_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005963
Chromosome:chromosome 1
Location:5390911
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g038050 COP7,HKR3,COP Histidine kinase rhodopsin 3; (1 of 1) PF00072//PF00512//PF01036 - Response regulator receiver domain (Response_reg) // His Kinase A (phospho-acceptor) domain (HisKA) // Bacteriorhodopsin-like protein (Bac_rhodopsin) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCTGACCCCCCACTGCCCACTGCCTCGCACACCCCCACCCCCATCCCC
Internal bar code:GTCCAACTCAGTCATTTATTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:849
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GCACACACACACACACACTC
Suggested primer 2:GTTTGGTGCCCTTCGTGTTC