Insertion junction: CLIP2.005975_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005975
Chromosome:chromosome 6
Location:2648350
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g270350 AMYB2,AMB2 Beta-amylase 2; (1 of 3) 3.2.1.2 - Beta-amylase / Saccharogen amylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAATGGCAGCCTGCCCATGTCAGGCGCAATCAATCTGAACACACGCACAC
Internal bar code:TGACGATCCAGGAGTTGTCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1076
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTGATGCAGTGTGTGTTG
Suggested primer 2:AGAAAAACAAGCGCACCGTC