Insertion junction: CLIP2.005983_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.005983
Chromosome:chromosome 2
Location:7568360
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393173 ELI8,ELI2,ELIP8 Early light-induced LHC-like protein; (1 of 5) PTHR14154//PTHR14154:SF14 - UPF0041 BRAIN PROTEIN 44-RELATED // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGATCCGGTGAGCTTCATACAACCTCCGCTTTCCCGCAACCGGTACACA
Internal bar code:GTAGCTCGACATGTGCTGCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1042
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGTGGTTACGACGAGCGA
Suggested primer 2:CTGTCGATCACGCAGCATTG