Insertion junction: CLIP2.005986_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.005986
Chromosome:chromosome 14
Location:3368000
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g629840 (1 of 22) PTHR11017//PTHR11017:SF145 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAATAATATGGGGGCTGGTGAGCTATTGGTCTTGGCGCTGGGCGCTGGGC
Internal bar code:CGGACCATTTGGTTACGTGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1550
LEAP-Seq percent confirming:91.4286
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGAGTGAGGGATGTAGGG
Suggested primer 2:CCCTGTCACTGTAACGCTGT