Insertion junction: CLIP2.005988_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.005988
Chromosome:chromosome 2
Location:1054431
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g080250 YGG1,CGL97,YLMG1 Conserved in the green lineage 97; (1 of 4) PF02325 - YGGT family (YGGT) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTCCTGATCAAAATCTATTTCCATTTCCTGCACACCACCTATCTGTGCC
Internal bar code:ATCAGCGCCTACCGCGGCGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:847
LEAP-Seq percent confirming:46.6667
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CCACTGCCCGATCCTTTCTT
Suggested primer 2:GAGTGGTGCTCTACTACGCC