Insertion junction: CLIP2.005988_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005988
Chromosome:chromosome 2
Location:1054433
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g080250 YGG1,CGL97,YLMG1 Conserved in the green lineage 97; (1 of 4) PF02325 - YGGT family (YGGT) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGAACCTAGGGGAGCATTTGGGTAATACGGATGCTTCCAAGTCAGGCAG
Internal bar code:ATCAGCGCCTACCGCGGCGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2127
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTGGTGCTCTACTACGCC
Suggested primer 2:CCACTGCCCGATCCTTTCTT