Insertion junction: CLIP2.006015_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.006015
Chromosome:chromosome 16
Location:2859431
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g662951 (1 of 1) PF06985//PF12796//PF13637 - Heterokaryon incompatibility protein (HET) (HET) // Ankyrin repeats (3 copies) (Ank_2) // Ankyrin repeats (many copies) (Ank_4) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATTCTAGGAACTAGCTTATATGACGTGTAAGGATGATAGGATCTGATTC
Internal bar code:GATGGTTAGTTTTAAGGGCTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:262
LEAP-Seq percent confirming:31.25
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCTTATGTGGGTGTGGCT
Suggested primer 2:GGCCCAAGCAGCAAACTAAC