Insertion junction: CLIP2.006017_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.006017
Chromosome:chromosome 4
Location:1548688
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g213500 TMG8 (1 of 1) PTHR23417//PTHR23417:SF18 - 3-DEOXY-D-MANNO-OCTULOSONIC-ACID TRANSFERASE/TRNA GUANINE-N 7 - -METHYLTRANSFERASE // SUBFAMILY NOT NAMED; tRNA (guanine-N7)-methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTGTGTCGACGACGCTGCGCGCACGCGGTCTGCCCCCAAGCATTCGAC
Internal bar code:CTTATGGGCCCGGGTTAAATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2676
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CTATGACTCACCCCCTCCCA
Suggested primer 2:CGCAGCATCTCTACGTAGCA