Insertion junction: CLIP2.006024_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.006024
Chromosome:chromosome 17
Location:4100154
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g728950 RFD2 diaminohydroxyphosphoribosylaminopyrimidine deaminase; (1 of 1) PTHR11079//PTHR11079:SF76 - CYTOSINE DEAMINASE // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAGCGGCCAAGCGGGACCGCGGGAGGGGAGAGGATGCCGAGATGAGTG
Internal bar code:TGCATTTTTAATCTTAAGGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2634
LEAP-Seq percent confirming:48.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCAAGGCTGGAAACACTG
Suggested primer 2:GTGAGTGTGGAGTGGGAGTG