Insertion junction: CLIP2.006026_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.006026
Chromosome:chromosome 17
Location:2222321
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g712850 TRX23,TRL9 (1 of 11) IPR012336//IPR013766 - Thioredoxin-like fold // Thioredoxin domain; Thioredoxin-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCAGCGCTGTGGTTGTCAGCAGCGTGCCTCGATACAGGTGCCTTTCGT
Internal bar code:ACAGACGTACGGTTGGAAGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3087
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:ATGACCTCGTTTGCTGGGAG
Suggested primer 2:GGTATCACGGTACCTCTGCG