Insertion junction: CLIP2.006026_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.006026
Chromosome:chromosome 17
Location:2222323
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g712850 TRX23,TRL9 (1 of 11) IPR012336//IPR013766 - Thioredoxin-like fold // Thioredoxin domain; Thioredoxin-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTCTGGGGACCCCGCAGCCAGGCTGCTACGAGCGAGCACACGGGTACAC
Internal bar code:CTATGCAATTGCTTCCGAAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:845
LEAP-Seq percent confirming:52.1739
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GGTATCACGGTACCTCTGCG
Suggested primer 2:ATGACCTCGTTTGCTGGGAG